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Stability of Plant mRNAs Depends on the Length of the 3´-Untranslated Region

A. M. Schwartz#, T. V. Komarova#, M. V. Skulachev*, A. S. Zvereva, Yu. L. Dorokhov, and J. G. Atabekov

Department of Virology and Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, 119992 Moscow, Russia; fax: (495) 938-0601; E-mail: max@genebee.msu.ru

* To whom correspondence should be addressed.

# These authors contributed equally to this study.

Received October 10, 2006
Eukaryotic mRNAs that prematurely terminate translation are recognized and degraded by nonsense mediated decay (NMD). This degradation pathway is well studied in animal and yeast cells. The data available imply that NMD also takes place in plants. However, the molecular mechanism of recognition and degradation of plant RNAs containing premature terminator codon (PTC) is not known. Here we report that in plant cells this mechanism involves the recognition of the sizes of the 3´-untranslated regions (3´UTR). Plant 3´UTRs longer than 300 nucleotides induce mRNA instability. Contrary to mammalian and yeast cells, this destabilization does not depend on the presence of any specific sequences downstream of the terminator codon. Unlike nuclear-produced mRNAs, plant virus vector long 3´UTR-containing RNAs, which are synthesized directly in the cytoplasm, are stable and translated efficiently. This shows that RNAs produced in the cytoplasm by viral RNA-dependent RNA polymerase are able to avoid the proposed mechanism.
KEY WORDS: nonsense mediated decay, RNA stability, agroinjection

DOI: 10.1134/S0006297906120145